Biofilm Removal and Chemical Sanitization of RO Systems

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Biofilm Removal and Chemical Sanitization of RO Systems

Biofilm Removal and Chemical Sanitization of RO Systems

1. Introduction

RO membranes in pharmaceutical water systems (Purified Water / WFI) are prone to biofilm formation due to microbial contamination and nutrient accumulation.

  • Biofilm is a slimy matrix of microorganisms, polysaccharides, and proteins attached to membrane surfaces.

  • Once formed, biofilms reduce RO efficiency, increase pressure drop, reduce permeate quality, and may lead to microbial excursions.


2. Biofilm Removal

Biofilms cannot be removed by plain flushing — they require chemical cleaning.

Steps for Biofilm Removal

  1. Initial Flush: Flush system with permeate water to remove loose debris.

  2. Chemical Circulation: Circulate cleaning solution (alkaline/acid/biocidal) through the RO at low pressure to avoid damaging membranes.

  3. Soaking Period: Allow soaking (30–60 minutes) for the chemicals to penetrate biofilm.

  4. Recirculation: Resume circulation to detach and dissolve biofilm residues.

  5. Rinsing: Thoroughly rinse with purified/deionized water until neutral pH is achieved.

  6. Microbial Verification: Test permeate and reject streams for microbial count before resuming service.


3. Chemical Sanitization

RO systems are sanitized periodically to control microbial growth and prevent biofilm reformation.

Common Sanitizing Agents

  • Sodium hypochlorite (NaOCl): Effective oxidizer but damages polyamide RO membranes → only used upstream or for non-PA membranes.

  • Peracetic acid (PAA): Strong oxidizing biocide, compatible with RO membranes, effective against spores and biofilm.

  • Hydrogen peroxide (H₂O₂): Strong oxidizer, can be used in combination with PAA.

  • Citric acid / phosphoric acid: Used to remove scale and as part of cleaning cycle.

  • Hot water sanitization (≥80 °C): Preferred for heat-tolerant RO membranes (pharma-grade membranes).


4. Best Practices for Efficiency

  • Alternating chemicals: Use both alkaline and acidic cleaners to remove organic and inorganic fouling.

  • PAA/H₂O₂ cycles: Effective for biofilm control while being membrane-compatible.

  • Cleaning frequency: Based on pressure drop, salt rejection %, or microbial counts.

  • Monitoring: Differential pressure, conductivity, TOC, and microbial levels indicate cleaning need.

  • Sanitization schedule: Routine sanitization (weekly/biweekly) to prevent biofilm recurrence.

  • Validation: Document cleaning effectiveness with microbial and TOC reduction studies.


5. Documentation

  • Sanitization protocol with chemical concentrations, contact times, and safety precautions.

  • Logs of cleaning frequency, agent used, exposure time, and rinse verification.

  • Microbiological and TOC test results before and after cleaning.

  • QA approval of cleaning/sanitization reports.


In short:
Biofilm removal in RO systems requires specialized cleaning chemicals (alkaline, acidic, oxidizing) followed by chemical sanitization (PAA, H₂O₂, or hot water). Routine monitoring and validated cleaning cycles are critical for ensuring consistent pharmaceutical water quality.

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